The museum is housed in the katholikon of the Venetian monastery of St. Francis. During the period of the Turkish occupation it was the Muslim mosque of Yussuf Pasha, while in modern times it was used as a cinema or a storehouse for military equipment. Since 1963 it has been functioning as the Archaeological Museum of the city. Apart from the permanent exhibition, the museum houses temporary exhibitions in the frame of certain local events
25 Chalidon Str., tel. +30821 90334
It contains impressive finds from the excavations of the ancient city of Kydonia, from Idramia, Aptera, Polyrinia, Kissamos, Elyros, Irtakina, Syia, Lissos, Chania, Axos, and Lappa.

Eleftherna (Eleutherna GR: Ελεύθερνα) is located on the foothills of Mount Psiloritis, in the heartland of Crete, 25 km. southeastern of Rethymnon. It was inhabited continuously from the Sub-Neolithic period (4th millennium BC) down to the 12th cent. AD and its rich history is now summarized by five hundred selected artifacts unearthed from houses, shrines, public buildings and tombs.